[ROM][Marshmallow][6.0.1][MMB29K] Cataclysm & Mod [04.01.2016]

If you are on October 27th release or another custom ROM:

1. In TWRP, go to Wipe > Advanced Wipe and wipe everything but internal storage.
2. Select Reboot in TWRP and reboot to bootloader.
3. Plug your phone into the computer, download the MRA58R zip from the Factory Images site, unzip it and extract the system.img, move it to which ever folder you want and run the command fastboot flash system system.img (Google if you need help with this or use this thread).
4. Boot into recovery mode (TWRP) from the bootloader (use volumes keys to move down and power button to select).
5. Flash Cataclysm Mod zip.
6. Flash SuperSU if you want root.
7. Flash a custom kernel if you want.

If you are on stock:

1. Make sure you are on MRA58R; if not, boot into the bootloader and follow step 3 above.
2. Boot into recovery mode (TWRP) from the bootloader (use volumes keys to move down and power button to select).
3. Flash Cataclysm Mod zip.
4. Flash SuperSU if you want root.
7. Flash a custom kernel if you want.

If already on Cataclysm Mod:

1. Flash in TWRP, no wipes necessary.
2. Flash SuperSU if you are not already rooted and want to be.
3. Flash a custom kernel if you want.

Dec 08, 2015: Cataclysm Dec 08, 2015 Stable Release
Dec 08, 2015: Sources updated to android 6.0.1.
Nov 28, 2015: Lockscreen shortcut color: Colorful/Black and white/White.
Nov 28, 2015: Fixed bluetooth icon sometimes sticking on statusbar.
Nov 28, 2015: Removed "Disable motion detection on doze".

Oct 27, 2015: Cataclysm Oct 27, 2015 Stable ReleaseRelease notes

Oct 26, 2015: Correctly update left shortcut icon if voice assist is disabled.

Oct 25, 2015: Wake on notification: option to enforce DnD rules.
Oct 25, 2015: Added padding on Nav keys so they resize when navbar is resized.
Oct 25, 2015: Speaker proximity rewritten from scratch.
Oct 25, 2015: Disable Smart Timeout on secure lockscreen to avoid fights with Face unlock.
Oct 25, 2015: Immersive mode style: NavBar only, StatusBar only.
Oct 25, 2015: Center battery glow on status bar expanded.
Oct 25, 2015: Fixed disable recents widget glitch.

Oct 24, 2015: Cataclysm Oct 24, 2015 Candidate ReleaseRelease notes
Oct 24, 2015: Security input prio: fixed double bouncing.
Oct 24, 2015: Fixed issue with quick pin unlock and sim pin.

Oct 23, 2015: Immersive mode + tile.
Oct 23, 2015: Fixed excessive battery redraw on notification panel expanded.
Oct 23, 2015: Proximity speaker: correctly activate on incoming calls.

Oct 22, 2015: Proximity speaker: correctly route audio call to BT if available.

Oct 21, 2015: Quick PIN Unlock.

Oct 20, 2015: Cataclysm Oct 20, 2015 Beta ReleaseRelease notes
Oct 20, 2015: Clear LED when notification is read/expanded not only on dismiss.
Oct 20, 2015: Don't disable LED on prio if checked and package has priority.
Oct 20, 2015: Disable LED on alarm only.

Oct 19, 2015: Shortcut to AppOps from App details.
Oct 19, 2015: Allow Navigation bar resizing in portrait or landscape indipendently.
Oct 19, 2015: Fixed Volume skip music tracks unreliability (also requires kernel patch).

Oct 18, 2015: Center clock should now stick correctly on reboot for some users.
Oct 18, 2015: Revert Alarm only icon, changed Prio icon to a different, more consistent one.
Oct 18, 2015: Fixed RingerMode tile not updating the icon (or missing) on DnD mode.

Oct 17, 2015: Cataclysm Oct 17, 2015 Beta ReleaseRelease notes
Oct 17, 2015: Fixed proximity speaker not activating.
Oct 17, 2015: Fixed Smart Radio not honoring the white list.
Oct 17, 2015: Don't clear LED and break notification sounds on screen on.
Oct 17, 2015: Charging LED prio fix.
Oct 17, 2015: Fixed left default lockscreen shortcut sometimes appearing as phone.
Oct 17, 2015: Right clock shouldn't appear sometimes when center clock is enabled.
Oct 17, 2015: Misc: Multi window.

Oct 16, 2015: Fixed global disable headsup notifications, also added dependency with per-app.
Oct 16, 2015: Rotation tile will show correct icon/text while locked in landscape.
Oct 16, 2015: NFC tile should be more reliable.
Oct 16, 2015: Use good ol' silent mode icon for alarm only settings, to differentiate from prio mode.
Oct 16, 2015: Cataclysm Backup will correctly backup and restore Battery styles and Tiles.
Oct 16, 2015: Reintroduce Ringermode tile (Normal/Vibrate only)
Oct 16, 2015: Reintroduce AppOps with 14 new Ops.

Oct 15, 2015: Cataclysm Oct 13, 2015 Beta ReleaseRelease notes

Oct 13, 2015: Everything from LP has been added to MM except:
- Quick PIN Unlock
- Enable Notification Ticker

• Quick PIN Unlock
• Immersive mode
• Custom batteries
• Softkeys fade mod
• Navbar cursor control
• Allow data background while on battery saver per-app
• Battery save scheduler
• Smart Timeout
• Battery saver and Smart Radio intents
• Wake on notifications + per-app
• Force headsup
• Clear all notifications button on status bar
• Show status bar clock on keyguard
• Hide status bar elements
• Disable album arts
• AppOps
• Security input priority
• Opacity slider for keyguard
• Disable LED on prio or None
• Disable recents widget
• Hide IME switcher
• Show statusbar clock on lockscreen
• Vibrate on remote call pickup/hangup
• InCall blocker
• Don't send number to unknown
• Close dialer after normal hangup
• Hide multiple lockscreen elements
• Expand all notifications
• Custom headsup timeout
• Show app optimization on first boot
• Volume controls always music
• Disable QS on secure lockscreen
• Quick Settings: Quick Puldown (includes DRAG)
• Custom Quick settings with rearrange/scale and much more
• LTE and 3G only network modes
• Lockscreen double tap to sleep
• NavigationBar swipe to sleep
• NavigationBar show left menu
• Wider landscape notification panel
• LED Customization + per-app
• Per-app Lockscreen notifications/force peeking
• Battery charging led
• Disable key press on security input
• Custom left/right lockscreen shortcuts
• Force show menu
• Center clock/Hide clock
• Unlink notification volume
• Smart Radio
• Raised volumes steps number
• Custom lockscreen wallpaper
• Volume music control
• Volume rocker wake
• Clear all recents button
• Longpress actions to clock/date
• Disable OTA update
• Volume key cursor control
• Sleep button on status bar
• NFC polling mode/Disable NFC sounds
• Lockscreen rotation
• AM/PM clock style
• Disable DUN required for tethering
• Disable full screen landscape keyboard
• Allow 180° rotation
• Disable low battery warning
• Disable wake when (un)plugged
• Longpress recents for last task
• Longpress back to kill non system apps
• Resize Navigation Bar
• Disable ADB notification
• Reboot menu/Disable when secure/Hotreboot

If you want to do this yourself, you will need to have a deodexed ROM that you are working with. If you know how to deoedex that's good for you, but if you are not able to do that, and the ROM is not deodexed, then you are out of luck. There are smali files that you need to add to the system ui which are only found in deodexed APKs

Recommended Tools: Notepad ++, Advanced APK Tool, 7zip

1. You need to download the Smali FIles for APK Tool 2.x.x which can be found at http://www.3minit.com/
2. From Root Explorer - Copy Your SystemUI.apk and framework-res.apk to your SD Card
3. Pull SystemUI.apk and framework-res.apk off your phone and on your Computer
Extremely Important (Note: Use 7zip to extract META-INF folder and AndroidManifest.xml to Desktop before you decompile)
4. Install the Framework and decompile your SystemUI.apk (This requires Decompile knowledge - You should know what I am talking about)
5. Once decompiled, navigate to res/layout/system_icons.xml and open with notepad ++

6. Find:

Code:
android:layout_width="9.5dip"
and

Code:
android:layout_height="14.5dip"
Note: These values may not be an exact match, doesn't matter

Change both values to

Code:
android:layout_width="0.0dip"
and

Code:
android:layout_height="0.0dip"
7. Hit enter and directly underneath that line add:

Code:
<com.android.systemui.statusbar.policy.MinitBattery android:layout_width="wrap_content" android:layout_height="wrap_content" />